"""Setup script for Microscopy Object Detection Application."""

from setuptools import setup, find_packages
from pathlib import Path

# Read the contents of README file
this_directory = Path(__file__).parent
long_description = (this_directory / "README.md").read_text(encoding="utf-8")

# Read requirements
requirements = (this_directory / "requirements.txt").read_text().splitlines()
requirements = [
    req.strip() for req in requirements if req.strip() and not req.startswith("#")
]

setup(
    name="microscopy-object-detection",
    version="1.0.0",
    author="Your Name",
    author_email="your.email@example.com",
    description="Desktop application for detecting and segmenting organelles in microscopy images using YOLOv8-seg",
    long_description=long_description,
    long_description_content_type="text/markdown",
    url="https://github.com/yourusername/object_detection",
    packages=find_packages(exclude=["tests", "tests.*", "docs"]),
    include_package_data=True,
    install_requires=requirements,
    python_requires=">=3.8",
    classifiers=[
        "Development Status :: 4 - Beta",
        "Intended Audience :: Science/Research",
        "Topic :: Scientific/Engineering :: Image Recognition",
        "Topic :: Scientific/Engineering :: Bio-Informatics",
        "License :: OSI Approved :: MIT License",
        "Programming Language :: Python :: 3",
        "Programming Language :: Python :: 3.8",
        "Programming Language :: Python :: 3.9",
        "Programming Language :: Python :: 3.10",
        "Programming Language :: Python :: 3.11",
        "Operating System :: OS Independent",
    ],
    entry_points={
        "console_scripts": [
            "microscopy-detect=src.cli:main",
        ],
        "gui_scripts": [
            "microscopy-detect-gui=src.gui_launcher:main",
        ],
    },
    keywords="microscopy yolov8 object-detection segmentation computer-vision deep-learning",
    project_urls={
        "Bug Reports": "https://github.com/yourusername/object_detection/issues",
        "Source": "https://github.com/yourusername/object_detection",
        "Documentation": "https://github.com/yourusername/object_detection/blob/main/README.md",
    },
)