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Added current, failed to make it work, new error to be fixed found

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ralf 2024-07-22 13:28:48 +03:00
parent d825cdc811
commit 7d6124752b
3 changed files with 8 additions and 4 deletions
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5
Model.py
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@ -348,8 +348,9 @@ class Model:
FCa_0, # FCa FCa_0, # FCa
] ]
def calculated_current(self): def calculated_current(self, states, t, V):
return ICaL = self.gCaL * states[1, :] * (V - self.ECaL)
return ICaL
def solve(self, initial_values, tspan, dt, times): def solve(self, initial_values, tspan, dt, times):
times = np.arange(*tspan, dt) times = np.arange(*tspan, dt)

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__pycache__/Model.cpython-311.pyc
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5
fitter.py
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@ -68,7 +68,10 @@ class Fitter:
initial_values=self.initial_values initial_values=self.initial_values
) )
_calc_curr = model.calculated_current() states = self.initial_values
V = model.mem_potential(t)
t = self.tspan
_calc_curr = model.calculated_current(states, t, V)
calculated_current = ( calculated_current = (
self.convolve_current(_calc_curr, tau=tau_RC)[self.current_time_indecies] self.convolve_current(_calc_curr, tau=tau_RC)[self.current_time_indecies]
+ offset + offset