diff --git a/Model.py b/Model.py index 4eb6ced..50010aa 100644 --- a/Model.py +++ b/Model.py @@ -349,7 +349,7 @@ class Model: FCa_0, # FCa ] - def calculated_current(self, states, t, V): + def calculated_current(self, states, V): ICaL = self.gCaL * states[1, :] * (V - self.ECaL) return ICaL diff --git a/__pycache__/Model.cpython-311.pyc b/__pycache__/Model.cpython-311.pyc index 51c2fda..21ab746 100644 Binary files a/__pycache__/Model.cpython-311.pyc and b/__pycache__/Model.cpython-311.pyc differ diff --git a/fitter.py b/fitter.py index 7fd5a0b..de85aa7 100644 --- a/fitter.py +++ b/fitter.py @@ -42,7 +42,7 @@ class Fitter: return current k = np.zeros(current.size) - k[k.size // 2:] = np.exp(-np.arange(k.size // 2) / np.abs(tau)) + k[k.size // 2 :] = np.exp(-np.arange(k.size // 2) / np.abs(tau)) k /= k.sum() if tau > 0: @@ -65,13 +65,13 @@ class Fitter: times=self.time_points, tspan=self.tspan, dt=self.dt, - initial_values=self.initial_values + initial_values=self.initial_values, ) states = self.initial_values t = [0, 1000] V = model.mem_potential(t) - _calc_curr = model.calculated_current(states, t, V) + _calc_curr = model.calculated_current(states, V) calculated_current = ( self.convolve_current(_calc_curr, tau=tau_RC)[self.current_time_indecies] + offset @@ -153,7 +153,7 @@ class Fitter: initial_values=self.initial_values, tspan=self.tspan, dt=self.dt, - times=self.time_points + times=self.time_points, ) _calc_curr = model.calculated_current()