Marko Vendelin markov
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  • Joined on 2022-10-24
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markov created pull request hamed/Bayesian-fcs#50 2024-02-24 18:40:01 +02:00
Generate traces in parallel
markov pushed to gen at hamed/Bayesian-fcs 2024-02-24 18:37:38 +02:00
60dcd4fab9 Add support for generation of traces in parallel jobs
markov created branch gen in hamed/Bayesian-fcs 2024-02-24 14:22:27 +02:00
markov pushed to gen at hamed/Bayesian-fcs 2024-02-24 14:22:27 +02:00
475a6d2d10 Move brownian motion code into library
markov pushed to main at hamed/Bayesian-fcs 2024-02-24 09:59:31 +02:00
880f270dc7 Save HDF5 datasets using append mode
markov pushed to pi at divya/energy_transfer 2024-02-23 09:47:04 +02:00
73c77635e3 Fix Cr and Pi by default
markov commented on pull request divya/energy_transfer#2 2024-02-22 17:39:13 +02:00
Handling of volumes

closing this, merge another one

markov closed pull request divya/energy_transfer#2 2024-02-22 17:39:13 +02:00
Handling of volumes
markov created pull request divya/energy_transfer#3 2024-02-22 17:38:55 +02:00
pi
markov created branch pi in divya/energy_transfer 2024-02-22 17:38:34 +02:00
markov pushed to pi at divya/energy_transfer 2024-02-22 17:38:34 +02:00
5fa6bf3ef1 Apply fix pi to all dPi/dt
markov created pull request divya/energy_transfer#2 2024-02-22 17:21:08 +02:00
Handling of volumes
markov created branch volume in divya/energy_transfer 2024-02-22 17:20:52 +02:00
markov pushed to volume at divya/energy_transfer 2024-02-22 17:20:52 +02:00
f304b6aab8 Handling of volumes
markov closed issue hamed/Bayesian-fcs#49 2024-02-20 20:32:09 +02:00
seed looks to be not helping in reproducible random numbers generation
markov pushed to main at hamed/Bayesian-fcs 2024-02-20 20:32:09 +02:00
130d694074 Make sure that seed is taken into account, fixes #49
markov closed issue hamed/Bayesian-fcs#47 2024-02-20 17:17:18 +02:00
Generate should show concentration of the molecules
markov commented on issue hamed/Bayesian-fcs#47 2024-02-20 17:17:18 +02:00
Generate should show concentration of the molecules

Fixed in d4bdd67

markov pushed to main at hamed/Bayesian-fcs 2024-02-20 17:17:09 +02:00
d4bdd67a61 Print concentration used in generate
markov closed issue hamed/Bayesian-fcs#45 2024-02-20 16:54:32 +02:00
Allow to save limited number of trajectories