104 lines
2.6 KiB
TOML
104 lines
2.6 KiB
TOML
|
|
[build-system]
|
||
|
|
requires = ["setuptools>=45", "wheel", "setuptools_scm[toml]>=6.2"]
|
||
|
|
build-backend = "setuptools.build_meta"
|
||
|
|
|
||
|
|
[project]
|
||
|
|
name = "microscopy-object-detection"
|
||
|
|
version = "1.0.0"
|
||
|
|
description = "Desktop application for detecting and segmenting organelles in microscopy images using YOLOv8-seg"
|
||
|
|
readme = "README.md"
|
||
|
|
requires-python = ">=3.8"
|
||
|
|
license = { text = "MIT" }
|
||
|
|
authors = [{ name = "Your Name", email = "your.email@example.com" }]
|
||
|
|
keywords = [
|
||
|
|
"microscopy",
|
||
|
|
"yolov8",
|
||
|
|
"object-detection",
|
||
|
|
"segmentation",
|
||
|
|
"computer-vision",
|
||
|
|
"deep-learning",
|
||
|
|
]
|
||
|
|
classifiers = [
|
||
|
|
"Development Status :: 4 - Beta",
|
||
|
|
"Intended Audience :: Science/Research",
|
||
|
|
"Topic :: Scientific/Engineering :: Image Recognition",
|
||
|
|
"Topic :: Scientific/Engineering :: Bio-Informatics",
|
||
|
|
"License :: OSI Approved :: MIT License",
|
||
|
|
"Programming Language :: Python :: 3",
|
||
|
|
"Programming Language :: Python :: 3.8",
|
||
|
|
"Programming Language :: Python :: 3.9",
|
||
|
|
"Programming Language :: Python :: 3.10",
|
||
|
|
"Programming Language :: Python :: 3.11",
|
||
|
|
"Operating System :: OS Independent",
|
||
|
|
]
|
||
|
|
|
||
|
|
dependencies = [
|
||
|
|
"ultralytics>=8.0.0",
|
||
|
|
"PySide6>=6.5.0",
|
||
|
|
"pyqtgraph>=0.13.0",
|
||
|
|
"numpy>=1.24.0",
|
||
|
|
"opencv-python>=4.8.0",
|
||
|
|
"Pillow>=10.0.0",
|
||
|
|
"PyYAML>=6.0",
|
||
|
|
"pandas>=2.0.0",
|
||
|
|
"openpyxl>=3.1.0",
|
||
|
|
]
|
||
|
|
|
||
|
|
[project.optional-dependencies]
|
||
|
|
dev = [
|
||
|
|
"pytest>=7.0.0",
|
||
|
|
"pytest-cov>=4.0.0",
|
||
|
|
"black>=23.0.0",
|
||
|
|
"pylint>=2.17.0",
|
||
|
|
"mypy>=1.0.0",
|
||
|
|
]
|
||
|
|
|
||
|
|
[project.urls]
|
||
|
|
Homepage = "https://github.com/yourusername/object_detection"
|
||
|
|
Documentation = "https://github.com/yourusername/object_detection/blob/main/README.md"
|
||
|
|
Repository = "https://github.com/yourusername/object_detection"
|
||
|
|
"Bug Tracker" = "https://github.com/yourusername/object_detection/issues"
|
||
|
|
|
||
|
|
[project.scripts]
|
||
|
|
microscopy-detect = "src.cli:main"
|
||
|
|
|
||
|
|
[project.gui-scripts]
|
||
|
|
microscopy-detect-gui = "main:main"
|
||
|
|
|
||
|
|
[tool.setuptools]
|
||
|
|
package-dir = { "" = "." }
|
||
|
|
packages = [
|
||
|
|
"src",
|
||
|
|
"src.database",
|
||
|
|
"src.model",
|
||
|
|
"src.gui",
|
||
|
|
"src.gui.tabs",
|
||
|
|
"src.gui.dialogs",
|
||
|
|
"src.gui.widgets",
|
||
|
|
"src.utils",
|
||
|
|
]
|
||
|
|
|
||
|
|
[tool.setuptools.package-data]
|
||
|
|
src = ["database/*.sql"]
|
||
|
|
"" = ["config/*.yaml"]
|
||
|
|
|
||
|
|
[tool.black]
|
||
|
|
line-length = 88
|
||
|
|
target-version = ['py38', 'py39', 'py310', 'py311']
|
||
|
|
include = '\.pyi?$'
|
||
|
|
|
||
|
|
[tool.pylint.messages_control]
|
||
|
|
max-line-length = 88
|
||
|
|
|
||
|
|
[tool.mypy]
|
||
|
|
python_version = "3.8"
|
||
|
|
warn_return_any = true
|
||
|
|
warn_unused_configs = true
|
||
|
|
disallow_untyped_defs = false
|
||
|
|
|
||
|
|
[tool.pytest.ini_options]
|
||
|
|
testpaths = ["tests"]
|
||
|
|
python_files = ["test_*.py"]
|
||
|
|
python_functions = ["test_*"]
|
||
|
|
addopts = "-v --cov=src --cov-report=term-missing"
|