ralf
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4fa1acbb90
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quite frankly, no idea why it started fitting. No idea why theres an error on line 77, and line 108
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2024-09-09 12:48:50 +03:00 |
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ralf
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e11cc744d9
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first attempt at multiple_fitting, added things to git ignore, failed 1st attempt
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2024-09-09 12:21:41 +03:00 |
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ralf
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4173284800
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black vs flake8 conflicts are back, will fix later
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2024-09-02 15:19:03 +03:00 |
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ralf
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4864ed8349
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fixed formatting errors that were ignored previously
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2024-09-02 15:03:33 +03:00 |
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ralf
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5b630571b3
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fixed fitter and model
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2024-08-19 14:52:18 +03:00 |
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ralf
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06a2b217d4
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formatting
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2024-08-13 11:28:05 +03:00 |
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ralf
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2a687571c6
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adjusted tolerances, with little to no effect on results
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2024-08-13 11:15:44 +03:00 |
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ralf
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a2bb97fe22
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Model and fitter no longer print every iteration. Now need to fix the fitting and current
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2024-08-13 10:41:00 +03:00 |
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ralf
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3c22072933
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formatting
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2024-08-12 14:44:28 +03:00 |
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ralf
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fb78cc2ddb
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unfortunately unable to fix issue, current needs to be fixed
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2024-08-12 14:43:10 +03:00 |
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ralf
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85c519ce95
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reverted tomfoolery
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2024-08-12 14:05:54 +03:00 |
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ralf
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02bcffbe63
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no idea how to stop it from plotting too many plots
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2024-08-12 14:01:40 +03:00 |
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ralf
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4bebf2fece
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Added fits to git ignore
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2024-08-12 13:50:49 +03:00 |
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ralf
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d23ba8416c
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fitting is initialized, ftol met, issues to be resolved with current
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2024-08-12 13:40:13 +03:00 |
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ralf
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d374a34c65
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no idea why it keeps printing the plot from model.py + other unresolved bugs
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2024-08-12 13:15:13 +03:00 |
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ralf
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1498402be6
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kinks still not fixed, minor adjustment made
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2024-08-12 12:52:22 +03:00 |
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ralf
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e44c0b6a47
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Fitter now fits, some kinks yet to be fixed
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2024-08-12 12:50:50 +03:00 |
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ralf
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6633e99003
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model clarity improvement
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2024-08-08 13:45:53 +03:00 |
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ralf
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bb67e34f73
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Applied good practice tips; Fixed typos in expressions in model.py
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2024-08-08 11:01:19 +03:00 |
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ralf
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89c492dd6c
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progress without progress
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2024-08-06 10:53:09 +03:00 |
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ralf
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13033f6936
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Progress free coding
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2024-08-06 10:39:34 +03:00 |
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ralf
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f4169b17b8
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Progress - new typeError emerged on a new line
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2024-08-05 13:52:51 +03:00 |
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ralf
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a999da570e
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fixed iso to tag as is in the file, added function to print out attributes
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2024-08-05 13:27:23 +03:00 |
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ralf
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05656c85d6
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prelimenary exploration for fitter
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2024-08-05 13:19:34 +03:00 |
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ralf
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a5a731376d
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author has lost his mind
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2024-07-29 15:47:48 +03:00 |
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ralf
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c232400943
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minor attempt at improvement
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2024-07-29 15:38:38 +03:00 |
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ralf
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59d5efe418
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functioning data organizer for group fitting .h5 file
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2024-07-25 10:48:39 +03:00 |
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ralf
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c2fcdc0a24
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relocated things, new issue emerged
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2024-07-23 13:15:29 +03:00 |
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ralf
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7d6124752b
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Added current, failed to make it work, new error to be fixed found
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2024-07-22 13:28:48 +03:00 |
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ralf
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d825cdc811
|
minor changes for future work
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2024-07-17 15:47:26 +03:00 |
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ralf
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41b0e324f8
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placeholder function added to model
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2024-07-17 12:57:46 +03:00 |
|
ralf
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993b530f3a
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formatting change
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2024-07-17 12:43:51 +03:00 |
|
ralf
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48bd4ffaf2
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minor adjustments after trial and error
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2024-07-16 15:06:50 +03:00 |
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ralf
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d76122ee7b
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fixed previous error related to getting initial values. New error emerged, as there is no object or function called calculated_current() in model - no idea how code was able to function previously
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2024-07-16 14:41:22 +03:00 |
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ralf
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98e4587152
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minimal debug, issue of initial_values taking self from fitter not model still persists
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2024-07-15 14:10:59 +03:00 |
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ralf
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df8c89c8e3
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Defined new func in Model to import variables into fitter.py yet the issue of correct importing still presists
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2024-07-15 13:55:55 +03:00 |
|
ralf
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30289b5744
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TypeError replaced with IndexError
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2024-07-12 15:17:55 +03:00 |
|
ralf
|
0824b0c4fe
|
renamed into English
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2024-07-11 13:48:33 +03:00 |
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ralf
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e6fcf23d38
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Fixed mistake of adding the fitter to the wrong location
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2024-07-11 13:45:10 +03:00 |
|
ralf
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966833fd14
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added missing experiment fitter
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2024-07-11 13:43:33 +03:00 |
|
ralf
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eb32120675
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cleared up more errors
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2024-07-11 13:24:08 +03:00 |
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ralf
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7cf6590f94
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debugging of fitter, many issues still persist
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2024-07-11 13:05:32 +03:00 |
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ralf
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6e7a727b1a
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formatted statistiline_filter to standard
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2024-07-11 11:15:30 +03:00 |
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ralf
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645d908000
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Changed formatting, some conflicts yet to be resolved
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2024-07-11 10:58:18 +03:00 |
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f887c94a70
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Upload files to "/"
Added the Data, fitter, and statistiline_filter scripts that are necessary working with the model.
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2024-07-11 10:08:48 +03:00 |
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0e504c0176
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Upload files to "/"
Contains all of the variables and collection of differential equations required to model calcium dynamics inside a mouse ventricular myocyte.
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2024-07-11 09:59:57 +03:00 |
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2dba3ee35d
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Initial commit
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2024-07-11 09:55:58 +03:00 |
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